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ZIH
hpcsupport
hpc-compendium
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59de93c0
Commit
59de93c0
authored
3 years ago
by
Martin Schroschk
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Automated merge from preview to main
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Issue 263
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doc.zih.tu-dresden.de/docs/archive/migrate_to_atlas.md
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View file @
59de93c0
...
...
@@ -7,13 +7,12 @@
[
Atlas
](
system_atlas.md
)
is a different machine than
[
Deimos
](
system_deimos.md
)
, please have a look
at the table:
| | | |
|---------------------------------------------------|------------|-----------|
| |
**Deimos**
|
**Atlas**
|
|
**number of hosts**
| 584 | 92 |
|
**cores per host**
| 2...8 | 64 |
|
**memory \[GB\] per host**
| 8...64 | 64..512 |
|
**example benchmark: SciMark (higher is better)**
| 655 | 584 |
| | Deimos | Atlas |
|---------------------------------------------------|-----------:|----------:|
| number of hosts | 584 | 92 |
| cores per host | 2...8 | 64 |
| memory
\[
GB
\]
per host | 8...64 | 64..512 |
| example benchmark: SciMark (higher is better) | 655 | 584 |
A single thread on Atlas runs with a very poor performance in comparison
with the 6 year old Deimos. The reason for this is that the AMD CPU
...
...
@@ -37,13 +36,12 @@ The most important changes are:
`-M <memory per process in MByte>`
, the default is 300 MB, e.g.
`-M 2000`
.
| | | |
|-----------------------|--------|------------------------------------------------------|
| Hosts on Atlas | number | per process/core user memory limit in MB (-M option) |
| nodes with 64 GB RAM | 48 | 940 |
| nodes with 128 GB RAM | 24 | 1950 |
| nodes with 256 GB RAM | 12 | 4000 |
| nodes with 512 GB RAM | 8 | 8050 |
| Hosts on Atlas | Count | Per Process/Core User Memory Limit in MB (
`-M`
option) |
|-----------------------|-------:|-------------------------------------------------------:|
| nodes with 64 GB RAM | 48 | 940 |
| nodes with 128 GB RAM | 24 | 1950 |
| nodes with 256 GB RAM | 12 | 4000 |
| nodes with 512 GB RAM | 8 | 8050 |
-
Jobs with a job runtime greater than 72 hours (jobs that will run in
the queue
`long`
) will be collected over the day and scheduled in a
...
...
@@ -98,7 +96,7 @@ compiler comes from the Open64 suite. For convenience, other compilers are insta
shows good results as well. Please check the best compiler flags at
[this overview] developer.amd.com/Assets/CompilerOptQuickRef-62004200.pdf.
### MPI
p
arallel
a
pplications
### MPI
P
arallel
A
pplications
Please note the more convenient syntax on Atlas. Therefore, please use a
command like
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