From 3271ce94754296a3f386a9c7f566ded753509b43 Mon Sep 17 00:00:00 2001 From: LocNgu <loc.nguyen_dang_duc@tu-dresden.de> Date: Wed, 23 Jun 2021 12:03:17 +0200 Subject: [PATCH] Fix FEMSoftware.md --- .../docs/software/FEMSoftware.md | 29 ++++++++++--------- 1 file changed, 15 insertions(+), 14 deletions(-) diff --git a/doc.zih.tu-dresden.de/docs/software/FEMSoftware.md b/doc.zih.tu-dresden.de/docs/software/FEMSoftware.md index 05c059ccd..6566d8302 100644 --- a/doc.zih.tu-dresden.de/docs/software/FEMSoftware.md +++ b/doc.zih.tu-dresden.de/docs/software/FEMSoftware.md @@ -1,11 +1,11 @@ # FEM Software For an up-to-date list of the installed software versions on our -cluster, please refer to [SoftwareModulesList](SoftwareModulesList). +cluster, please refer to SoftwareModulesList **TODO LINK** (SoftwareModulesList). ## Abaqus -[ABAQUS](http://www.hks.com) is a general-purpose finite-element program +[ABAQUS](http://www.hks.com) **TODO links to realestate site** is a general-purpose finite-element program designed for advanced linear and nonlinear engineering analysis applications with facilities for linking-in user developed material models, elements, friction laws, etc. @@ -14,14 +14,14 @@ Eike Dohmen (from Inst.f. Leichtbau und Kunststofftechnik) sent us the attached description of his ABAQUS calculations. Please try to adapt your calculations in that way.\<br />Eike is normally a Windows-User and his description contains also some hints for basic Unix commands. ( -[ABAQUS-SLURM.pdf](%ATTACHURL%/ABAQUS-SLURM.pdf) - only in German) +ABAQUS-SLURM.pdf **TODO LINK** (%ATTACHURL%/ABAQUS-SLURM.pdf) - only in German) Please note: Abaqus calculations should be started with a batch script. -Please read the information about the [Batch System](BatchSystems) +Please read the information about the Batch System **TODO LINK ** (BatchSystems) SLURM. The detailed Abaqus documentation can be found at -<http://doc.zih.tu-dresden.de/abaqus> (only accessible from within the +abaqus **TODO LINK MISSING** (only accessible from within the TU Dresden campus net). \*Example - Thanks to Benjamin Groeger, Inst. f. Leichtbau und @@ -29,7 +29,7 @@ Kunststofftechnik) \* 1\. Prepare an Abaqus input-file (here the input example from Benjamin) -[Rot-modell-BenjaminGroeger.inp](%ATTACHURL%/Rot-modell-BenjaminGroeger.inp) +Rot-modell-BenjaminGroeger.inp **TODO LINK** (%ATTACHURL%/Rot-modell-BenjaminGroeger.inp) 2\. Prepare a batch script on taurus like this @@ -60,7 +60,7 @@ CFX](http://www.ansys.com) used to be separate packages in the past and are now combined. ANSYS, like all other installed software, is organized in so-called -[modules](RuntimeEnvironment). To list the available versions and load a +modules **TODO LINK** (RuntimeEnvironment). To list the available versions and load a particular ANSYS version, type ``` @@ -85,7 +85,7 @@ runwb2 ``` If more time is needed, a CPU has to be allocated like this (see topic -[batch systems](BatchSystems) for further information): +batch systems **TODO LINK** (BatchSystems) for further information): ``` module load ANSYS/VERSION @@ -95,11 +95,11 @@ runwb2 **Note:** The software NICE Desktop Cloud Visualization (DCV) enables to remotly access OpenGL-3D-applications running on taurus using its GPUs -(cf. [virtual desktops](Compendium.VirtualDesktops)). Using ANSYS +(cf. virtual desktops **TODO LINK** (Compendium.VirtualDesktops)). Using ANSYS together with dcv works as follows: -- Follow the instructions within [virtual - desktops](Compendium.VirtualDesktops) +- Follow the instructions within virtual + desktops **TODO LINK** (Compendium.VirtualDesktops) - \<pre> module load ANSYS\</pre> - \<pre> unset SLURM_GTIDS\</pre> - Note the hints w.r.t. GPU support on dcv side @@ -141,11 +141,11 @@ to enter it into an XML file in your home. This setting will then be used for all your runwb2 jobs. While it is also possible to edit this setting via the Mechanical GUI, experience shows that this can be problematic via X-Forwarding and we only managed to use the GUI properly -via [DCV](DesktopCloudVisualization), so we recommend you simply edit +via DCV **TODO LINK** (DesktopCloudVisualization), so we recommend you simply edit the XML file directly with a text editor of your choice. It is located under: -*$HOME/.mw/Application Data/Ansys/v181/SolveHandlers.xml* +'*$HOME/.mw/Application Data/Ansys/v181/SolveHandlers.xml*' (mind the space in there.) You might have to adjust the ANSYS Version (v181) in the path. In this file, you can find the parameter @@ -163,7 +163,8 @@ match your used --cpus-per-task parameter in your sbatch script. finite element analysis, solver and Simulation software package for various physics and engineering applications, especially coupled phenomena, or multiphysics." -[\[http://en.wikipedia.org/wiki/COMSOL_Multiphysics Wikipedia]([http://en.wikipedia.org/wiki/COMSOL_Multiphysics Wikipedia) +[\[http://en.wikipedia.org/wiki/COMSOL_Multiphysics Wikipedia] +([http://en.wikipedia.org/wiki/COMSOL_Multiphysics Wikipedia) \] Comsol may be used remotely on ZIH machines or locally on the desktop, -- GitLab